EnhancerDB
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  3. rs138614796[chr17:55610252]
Enhancers that have rs138614796[chr17:55610252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138614796[chr17:55610252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55610242 55610257 TFAP2A JASPAR yes 54965496
chr17 55610244 55610259 TFAP2C JASPAR yes 54965497
chr17 55610245 55610256 TFAP2A JASPAR yes 54965498
chr17 55610245 55610256 TFAP2B JASPAR yes 54965499
chr17 55610245 55610256 TFAP2C JASPAR yes 54965500
chr17 55610246 55610255 TFAP2A JASPAR yes 54965501
chr17 55610250 55610255 SP1 TRANSFAC yes 54965502
Genes associated with rs138614796[chr17:55610252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More