EnhancerDB
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  3. rs138678977[chr6:25179578]
Enhancers that have rs138678977[chr6:25179578]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138678977[chr6:25179578]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25179568 25179589 IRF1 JASPAR yes 100832363
chr6 25179572 25179586 POU1F1 JASPAR yes 100832364
chr6 25179573 25179585 POU3F1 JASPAR yes 100832365
chr6 25179573 25179585 POU3F2 JASPAR yes 100832366
chr6 25179573 25179586 POU2F2 JASPAR yes 100832367
Genes associated with rs138678977[chr6:25179578], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More