EnhancerDB
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  3. rs138716671[chr12:125033116]
Enhancers that have rs138716671[chr12:125033116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138716671[chr12:125033116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 21581013
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 108068905
chr12 125032378 125033631 ZNF143 GTRD no Epithelial (MCF-7) 21581014
chr12 125032378 125033631 ZNF143 GTRD no Epithelial (MCF-7) 108068906
chr12 125032929 125033434 SOX2 GTRD no Neural Stem Cells (H9) 108068907
chr12 125033112 125033126 E2F7 JASPAR yes 124392516
chr12 125033113 125033125 E2F8 JASPAR yes 124392517
chr12 125033113 125033127 E2F7 JASPAR yes 124392518
chr12 125033114 125033126 E2F8 JASPAR yes 124392519
chr12 125033115 125033125 ZNF740 JASPAR yes 124392520
chr12 125033116 125033126 ZNF740 JASPAR yes 124392521
Genes associated with rs138716671[chr12:125033116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More