EnhancerDB
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  3. rs138729546[chr12:105066442]
Enhancers that have rs138729546[chr12:105066442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 105058565 105083795 enh14949
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 105066347 105066673 vista14727
VISTA
Transcript factors that have rs138729546[chr12:105066442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 105066246 105066642 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21569725
chr12 105066246 105066642 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108055672
chr12 105066357 105066621 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569726
chr12 105066357 105066621 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055673
chr12 105066442 105066446 LFA1 TRANSFAC yes 82469339
chr12 105066442 105066446 LFA1 TRANSFAC yes 123405744
Genes associated with rs138729546[chr12:105066442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More