EnhancerDB
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  3. rs138749669[chr1:16516379]
Enhancers that have rs138749669[chr1:16516379]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138749669[chr1:16516379]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16516367 16516380 NFKB1 JASPAR yes 27033607
chr1 16516367 16516380 NFKB2 JASPAR yes 27033608
chr1 16516368 16516379 NFKB1 JASPAR yes 27033609
chr1 16516369 16516379 NFKB1 JASPAR yes 27033611
chr1 16516375 16516381 SP1 TRANSFAC yes 27033612
chr1 16516375 16516385 SP1 JASPAR yes 27033613
chr1 16516377 16516382 SP1 TRANSFAC yes 27033614
Genes associated with rs138749669[chr1:16516379], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More