EnhancerDB
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  3. rs138841217[chr17:42872192]
Enhancers that have rs138841217[chr17:42872192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42867613 42875555 enh17184
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs138841217[chr17:42872192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42871585 42873403 ZNF274 GTRD no Liver (HepG2) 108263366
chr17 42871657 42873832 ZNF274 GTRD no Liver (HepG2) 108263367
chr17 42871934 42873794 ZNF274 GTRD no Liver (HepG2) 108263368
chr17 42871981 42873925 ZNF274 GTRD no Liver (HepG2) 108263369
chr17 42872035 42873674 ZNF274 GTRD no Liver (HepG2) 108263370
chr17 42872047 42872620 ZNF274 GTRD no Liver (HepG2) 108263371
chr17 42872055 42872755 ZNF274 GTRD no Liver (HepG2) 108263372
chr17 42872062 42872675 ZNF274 GTRD no Liver (HepG2) 108263373
chr17 42872101 42872523 ZNF274 GTRD no Liver (HepG2) 108263374
chr17 42872115 42873833 ZNF274 GTRD no Liver (HepG2) 108263375
chr17 42872182 42872197 SCRT1 JASPAR yes 54414338
chr17 42872191 42872200 RUNX2 JASPAR yes 54414339
chr17 42872191 42872655 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21762973
chr17 42872191 42872655 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108263376
Genes associated with rs138841217[chr17:42872192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More