EnhancerDB
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  3. rs138963050[chr12:52610688]
Enhancers that have rs138963050[chr12:52610688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138963050[chr12:52610688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52610426 52611030 TCF7L2 GTRD no Colon (HCT116) 21546810
chr12 52610459 52611030 ZNF143 GTRD no Epithelial (MCF-7) 21546811
chr12 52610465 52610999 TCF7L2 GTRD no Colon (HCT116) 21546812
chr12 52610499 52611032 ZNF143 GTRD no Epithelial (MCF-7) 21546813
chr12 52610532 52611436 ZNF143 GTRD no Epithelial (MCF-7) 21546814
chr12 52610569 52610856 ZNF143 GTRD no Epithelial (MCF-7) 21546815
chr12 52610683 52610688 TFAP2A TRANSFAC yes 120929272
chr12 52610683 52610689 MZF1 JASPAR yes 120929273
chr12 52610686 52610700 STAT1 JASPAR yes 120929274
Genes associated with rs138963050[chr12:52610688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More