EnhancerDB
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  3. rs138998754[chr12:50951919]
Enhancers that have rs138998754[chr12:50951919]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138998754[chr12:50951919]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50951910 50951924 PLAG1 JASPAR yes 120843618
chr12 50951917 50951925 TBX15 JASPAR yes 120843619
chr12 50951917 50951928 E2F6 JASPAR yes 120843620
chr12 50951918 50951923 SP1 TRANSFAC yes 120843621
Genes associated with rs138998754[chr12:50951919], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More