EnhancerDB
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  3. rs139000642[chr1:116085872]
Enhancers that have rs139000642[chr1:116085872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116084825 116092215 enh12178
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Breast Uterus Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs139000642[chr1:116085872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116085863 116085874 CDX2 JASPAR yes 31746331
chr1 116085864 116085875 HOXA10 JASPAR yes 31746332
chr1 116085865 116085874 CDX1 JASPAR yes 31746333
Genes associated with rs139000642[chr1:116085872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More