EnhancerDB
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  3. rs139006955[chr12:49626080]
Enhancers that have rs139006955[chr12:49626080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49623729 49631475 enh2326
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Uterus Blood (Karpas-422) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs139006955[chr12:49626080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49624905 49626990 ZNF274 GTRD no Blood (GM12878) 21544504
chr12 49624905 49626990 ZNF274 GTRD no Blood (GM12878) 108030029
chr12 49624905 49626990 ZNF274 GTRD no Blood (GM12878) 108030030
chr12 49625219 49626855 ZNF274 GTRD no Blood (GM12878) 21544505
chr12 49625219 49626855 ZNF274 GTRD no Blood (GM12878) 108030031
chr12 49625862 49626959 ZNF274 GTRD no Blood (GM12878) 21544506
chr12 49625862 49626959 ZNF274 GTRD no Blood (GM12878) 108030032
chr12 49625961 49627207 ZNF274 GTRD no Blood (GM12878) 21544507
chr12 49625961 49627207 ZNF274 GTRD no Blood (GM12878) 108030033
chr12 49626067 49626082 AR JASPAR yes 120766765
chr12 49626078 49626093 MAFK JASPAR yes 120766766
Genes associated with rs139006955[chr12:49626080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 50231573 50236912 - BCDIN3D ENSG00000186666.4 50236912 605493 Pancreas 0.867271 12038