EnhancerDB
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  3. rs139026996[chr16:89371884]
Enhancers that have rs139026996[chr16:89371884]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139026996[chr16:89371884]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89369085 89371959 ZNF143 GTRD no Epithelial (MCF-7) 21738054
chr16 89369085 89371959 ZNF143 GTRD no Epithelial (MCF-7) 108225484
chr16 89369859 89372452 TCF7L2 GTRD no Colon (HCT116) 21738055
chr16 89369859 89372452 TCF7L2 GTRD no Colon (HCT116) 108225492
chr16 89371872 89371884 TFAP2A JASPAR yes 12328697
chr16 89371872 89371884 TFAP2B JASPAR yes 12328698
chr16 89371872 89371884 TFAP2C JASPAR yes 12328699
Genes associated with rs139026996[chr16:89371884], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More