EnhancerDB
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  3. rs139029096[chr15:40359422]
Enhancers that have rs139029096[chr15:40359422]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139029096[chr15:40359422]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40357371 40361543 ZNF274 GTRD no Bone Marrow (K562) 21649685
chr15 40357371 40361543 ZNF274 GTRD no Bone Marrow (K562) 108133816
chr15 40357630 40359536 ZNF274 GTRD no Bone Marrow (K562) 21649701
chr15 40358906 40359422 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649804
chr15 40358941 40359422 ZNF274 GTRD no Cervix (HeLa-S3) 21649805
chr15 40358955 40359429 ZNF274 GTRD no Bone Marrow (K562) 21649806
chr15 40359008 40359422 ZNF274 GTRD no Liver (HepG2) 21649810
chr15 40359095 40359571 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649811
chr15 40359213 40359717 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649812
chr15 40359412 40359423 FOXC1 JASPAR yes 22925584
chr15 40359412 40359424 FOXC2 JASPAR yes 22925585
chr15 40359420 40359424 YY1 TRANSFAC yes 22925586
Genes associated with rs139029096[chr15:40359422], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More