EnhancerDB
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  3. rs139041352[chr16:87498587]
Enhancers that have rs139041352[chr16:87498587]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87488525 87523615 enh16897
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139041352[chr16:87498587]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87495790 87499579 ZNF274 GTRD no Liver (HepG2) 21733364
chr16 87495790 87499579 ZNF274 GTRD no Liver (HepG2) 108219302
chr16 87496236 87499325 ZNF274 GTRD no Liver (HepG2) 21733365
chr16 87496236 87499325 ZNF274 GTRD no Liver (HepG2) 108219303
chr16 87498429 87500140 ZNF274 GTRD no Cervix (HeLa-S3) 21733366
chr16 87498429 87500140 ZNF274 GTRD no Cervix (HeLa-S3) 108219304
chr16 87498559 87499754 ZNF274 GTRD no Cervix (HeLa-S3) 21733367
chr16 87498559 87499754 ZNF274 GTRD no Cervix (HeLa-S3) 108219305
chr16 87498561 87499177 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21733368
chr16 87498561 87499177 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108219306
chr16 87498577 87499041 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21733369
chr16 87498577 87499041 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108219307
chr16 87498578 87498588 GABPA JASPAR yes 12218773
chr16 87498581 87498588 SPIB JASPAR yes 12218774
Genes associated with rs139041352[chr16:87498587], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More