EnhancerDB
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  3. rs139041456[chr1:201708192]
Enhancers that have rs139041456[chr1:201708192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139041456[chr1:201708192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201707856 201710208 ZNF143 GTRD no Epithelial (MCF-7) 21365284
chr1 201707856 201710208 ZNF143 GTRD no Epithelial (MCF-7) 107856978
chr1 201707976 201710210 ZNF143 GTRD no Epithelial (MCF-7) 21365285
chr1 201707976 201710210 ZNF143 GTRD no Epithelial (MCF-7) 107856979
chr1 201708125 201710157 ZNF143 GTRD no Epithelial (MCF-7) 21365286
chr1 201708125 201710157 ZNF143 GTRD no Epithelial (MCF-7) 107856980
chr1 201708176 201708197 ZNF263 JASPAR yes 34526880
chr1 201708183 201708194 EBF1 JASPAR yes 34526881
chr1 201708189 201708210 ZNF263 JASPAR yes 34526882
chr1 201708192 201708198 PEA3 TRANSFAC yes 34526883
Genes associated with rs139041456[chr1:201708192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More