EnhancerDB
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  3. rs139052406[chr1:205281824]
Enhancers that have rs139052406[chr1:205281824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205280105 205289755 enh12590
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs139052406[chr1:205281824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205281820 205281832 HES5 JASPAR yes 34753680
chr1 205281820 205281832 HES7 JASPAR yes 34753681
Genes associated with rs139052406[chr1:205281824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More