EnhancerDB
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  3. rs139053466[chr5:148341426]
Enhancers that have rs139053466[chr5:148341426]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148334219 148384969 enh22691
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Breast Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs139053466[chr5:148341426]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148341416 148341437 IRF1 JASPAR yes 66777312
chr5 148341420 148341435 FOXP1 JASPAR yes 66777313
chr5 148341421 148341436 FOXP1 JASPAR yes 66777314
chr5 148341421 148341442 IRF1 JASPAR yes 66777315
chr5 148341422 148341437 FOXP1 JASPAR yes 66777316
chr5 148341422 148341443 IRF1 JASPAR yes 66777317
chr5 148341426 148341441 STAT2 JASPAR yes 66777318
Genes associated with rs139053466[chr5:148341426], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More