EnhancerDB
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  3. rs139065055[chr1:229230438]
Enhancers that have rs139065055[chr1:229230438]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs139065055[chr1:229230438]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 21389897
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 107877686
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 21389898
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 107877687
chr1 229228818 229230966 ZNF274 GTRD no Cervix (HeLa-S3) 21389899
chr1 229228818 229230966 ZNF274 GTRD no Cervix (HeLa-S3) 107877688
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 21389900
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 107877689
chr1 229228830 229232022 ZBTB33 GTRD no Lung (A549) 107877691
chr1 229228852 229230474 ZBTB33 GTRD no Lung (A549) 107877693
chr1 229228864 229230913 ZNF274 GTRD no Cervix (HeLa-S3) 21389903
chr1 229228864 229230913 ZNF274 GTRD no Cervix (HeLa-S3) 107877695
chr1 229228877 229232149 ZBTB33 GTRD no Lung (A549) 107877698
chr1 229228881 229232191 ZBTB33 GTRD no Lung (A549) 107877700
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 21389909
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 107877703
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 21389915
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 107877710
chr1 229229008 229230445 ZBTB33 GTRD no Lung (A549) 107877713
chr1 229229373 229230490 ZBTB33 GTRD no Lung (A549) 107877738
chr1 229229582 229230453 ZBTB33 GTRD no Lung (A549) 107877745
chr1 229229601 229230944 ZNF274 GTRD no Blood (GM12878) 107877747
chr1 229230197 229230937 ZNF274 GTRD no Cervix (HeLa-S3) 21389945
chr1 229230243 229231728 ZNF143 GTRD no Epithelial (MCF-7) 21389946
chr1 229230266 229231022 ZNF143 GTRD no Epithelial (MCF-7) 21389947
chr1 229230266 229231143 ZNF274 GTRD no Cervix (HeLa-S3) 21389948
chr1 229230266 229231174 ZNF143 GTRD no Epithelial (MCF-7) 21389949
chr1 229230279 229231743 ZNF143 GTRD no Epithelial (MCF-7) 21389950
chr1 229230300 229231826 ZNF143 GTRD no Epithelial (MCF-7) 21389951
chr1 229230302 229230937 ZNF143 GTRD no Epithelial (MCF-7) 21389952
chr1 229230312 229231169 ZNF143 GTRD no Epithelial (MCF-7) 21389953
chr1 229230315 229231963 ZNF143 GTRD no Epithelial (MCF-7) 21389954
chr1 229230336 229231805 ZNF143 GTRD no Epithelial (MCF-7) 21389955
chr1 229230348 229231906 ZNF274 GTRD no Cervix (HeLa-S3) 21389956
chr1 229230355 229231922 ZNF143 GTRD no Epithelial (MCF-7) 21389957
chr1 229230412 229232073 ZNF274 GTRD no Cervix (HeLa-S3) 21389958
chr1 229230413 229231028 ZNF274 GTRD no Liver (HepG2) 21389959
chr1 229230438 229230627 SOX2 GTRD no Neural Stem Cells (H9) 21389960
Genes associated with rs139065055[chr1:229230438], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More