EnhancerDB
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  3. rs139090231[chr1:8973383]
Enhancers that have rs139090231[chr1:8973383]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8954605 8983075 enh11478
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs139090231[chr1:8973383]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8973367 8973386 PITX2 TRANSFAC yes 26608191
chr1 8973373 8973386 ZBTB18 JASPAR yes 26608192
chr1 8973374 8973386 PKNOX1 JASPAR yes 26608193
chr1 8973374 8973386 TGIF1 JASPAR yes 26608194
chr1 8973375 8973384 SNAI2 JASPAR yes 26608195
chr1 8973375 8973385 FIGLA JASPAR yes 26608196
chr1 8973375 8973385 ID4 JASPAR yes 26608197
chr1 8973375 8973385 TCF3 JASPAR yes 26608198
chr1 8973375 8973385 TCF4 JASPAR yes 26608199
chr1 8973377 8973386 ZEB1 JASPAR yes 26608200
chr1 8973377 8973387 TBX21 JASPAR yes 26608201
chr1 8973378 8973386 MGA JASPAR yes 26608202
chr1 8973378 8973386 TBX15 JASPAR yes 26608203
chr1 8973378 8973386 TBX1 JASPAR yes 26608204
chr1 8973378 8973386 TBX4 JASPAR yes 26608205
chr1 8973378 8973386 TBX5 JASPAR yes 26608206
chr1 8973378 8973388 TBR1 JASPAR yes 26608207
chr1 8973378 8973391 SMAD2 JASPAR yes 26608208
Genes associated with rs139090231[chr1:8973383], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More