EnhancerDB
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  3. rs139136474[chr1:16522598]
Enhancers that have rs139136474[chr1:16522598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139136474[chr1:16522598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16522589 16522603 ONECUT1 JASPAR yes 27034796
chr1 16522589 16522603 ONECUT2 JASPAR yes 27034797
chr1 16522589 16522603 ONECUT3 JASPAR yes 27034798
chr1 16522594 16522609 FOXP1 JASPAR yes 27034799
chr1 16522595 16522616 IRF1 JASPAR yes 27034800
chr1 16522596 16522616 RREB1 JASPAR yes 27034801
chr1 16522597 16522608 FOXP2 JASPAR yes 27034802
Genes associated with rs139136474[chr1:16522598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More