EnhancerDB
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  3. rs139142725[chr2:38936701]
Enhancers that have rs139142725[chr2:38936701]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139142725[chr2:38936701]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38936685 38936706 ZNF263 JASPAR yes 73168216
chr2 38936689 38936704 FOXP1 JASPAR yes 73168217
chr2 38936689 38936710 IRF1 JASPAR yes 73168218
chr2 38936690 38936705 FOXP1 JASPAR yes 73168219
chr2 38936690 38936711 IRF1 JASPAR yes 73168220
chr2 38936693 38936708 FOXP1 JASPAR yes 73168222
chr2 38936694 38936709 FOXP1 JASPAR yes 73168223
chr2 38936694 38936715 IRF1 JASPAR yes 73168224
chr2 38936695 38936710 FOXP1 JASPAR yes 73168225
chr2 38936697 38936712 FOXP1 JASPAR yes 73168226
chr2 38936698 38936713 STAT2 JASPAR yes 73168227
chr2 38936701 38936713 FOXC2 JASPAR yes 73168228
Genes associated with rs139142725[chr2:38936701], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More