EnhancerDB
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  3. rs139238200[chr1:21652021]
Enhancers that have rs139238200[chr1:21652021]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 21651763 21652284 vista669
VISTA
Transcript factors that have rs139238200[chr1:21652021]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21652012 21652027 RUNX2 JASPAR yes 27296460
chr1 21652012 21652027 RUNX2 JASPAR yes 118245922
chr1 21652018 21652033 FOXP1 JASPAR yes 27296461
chr1 21652018 21652033 FOXP1 JASPAR yes 118245923
Genes associated with rs139238200[chr1:21652021], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More