EnhancerDB
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  3. rs139242808[chr1:23883343]
Enhancers that have rs139242808[chr1:23883343]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23868685 23885215 enh126
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139242808[chr1:23883343]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23880452 23886457 POLR2A UCSC Txn Factor no Conserved 107802423
chr1 23880452 23886457 POLR2A UCSC Txn Factor no Conserved 107802424
chr1 23883331 23883345 ATF7 JASPAR yes 27441645
chr1 23883331 23883345 BATF3 JASPAR yes 27441646
chr1 23883331 23883345 CREB3 JASPAR yes 27441647
chr1 23883331 23883345 CREB3L1 JASPAR yes 27441648
chr1 23883332 23883344 JDP2 JASPAR yes 27441649
chr1 23883332 23883346 XBP1 JASPAR yes 27441650
chr1 23883333 23883343 MLX JASPAR yes 27441651
chr1 23883333 23883343 SREBF1 JASPAR yes 27441652
chr1 23883333 23883343 SREBF2 JASPAR yes 27441653
chr1 23883339 23883349 RORA JASPAR yes 27441655
chr1 23883341 23883347 PTF TRANSFAC yes 27441656
Genes associated with rs139242808[chr1:23883343], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More