EnhancerDB
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  3. rs139320438[chr1:54769035]
Enhancers that have rs139320438[chr1:54769035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs139320438[chr1:54769035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54769030 54769040 SP1 JASPAR yes 28970845
chr1 54769031 54769037 SP1 TRANSFAC yes 28970846
chr1 54769034 54769044 SMAD3 JASPAR yes 28970847
Genes associated with rs139320438[chr1:54769035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More