EnhancerDB
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  3. rs139322336[chr1:225644594]
Enhancers that have rs139322336[chr1:225644594]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139322336[chr1:225644594]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225644583 225644597 ONECUT1 JASPAR yes 35742658
chr1 225644583 225644597 ONECUT2 JASPAR yes 35742659
chr1 225644583 225644597 ONECUT3 JASPAR yes 35742660
chr1 225644593 225644599 SOX10 JASPAR yes 35742661
Genes associated with rs139322336[chr1:225644594], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More