EnhancerDB
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  3. rs139322963[chr16:370973]
Enhancers that have rs139322963[chr16:370973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs139322963[chr16:370973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 368419 371886 ZNF274 GTRD no Blood (GM12878) 108170066
chr16 368676 371439 ZBTB33 GTRD no Lung (A549) 108170068
chr16 368894 371451 ZNF274 GTRD no Blood (GM12878) 108170071
chr16 369125 370983 ZBTB33 GTRD no Brain (SK-N-SH) 21683744
chr16 369125 370983 ZBTB33 GTRD no Brain (SK-N-SH) 108170075
chr16 369407 372176 ZNF274 GTRD no Bone Marrow (K562) 21683771
chr16 369407 372176 ZNF274 GTRD no Bone Marrow (K562) 108170104
chr16 369600 371462 TCF7L2 GTRD no Colon (HCT116) 21683777
chr16 369600 371462 TCF7L2 GTRD no Colon (HCT116) 108170112
chr16 369688 371515 ZBTB33 GTRD no Lung (A549) 108170116
chr16 369773 371170 ZBTB33 GTRD no Lung (A549) 108170121
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 21683784
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170123
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170124
chr16 370962 370975 NR2F1 JASPAR yes 9104051
chr16 370963 370981 RARA JASPAR yes 9104052
chr16 370964 370975 ESRRA JASPAR yes 9104053
chr16 370964 370975 ESRRB JASPAR yes 9104054
chr16 370965 370973 NR4A2 JASPAR yes 9104055
chr16 370966 370976 RORA JASPAR yes 9104056
Genes associated with rs139322963[chr16:370973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More