EnhancerDB
  1. Home
  2. SNP
  3. rs139340308[chr17:2051355]
Enhancers that have rs139340308[chr17:2051355]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2037625 2052035 enh4206
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs139340308[chr17:2051355]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2051353 2051362 ZEB1 JASPAR yes 52729955
chr17 2051353 2051365 NHLH1 JASPAR yes 52729956
chr17 2051353 2051368 SCRT1 JASPAR yes 52729957
chr17 2051354 2051364 ID4 JASPAR yes 52729958
chr17 2051354 2051364 NHLH1 JASPAR yes 52729959
chr17 2051354 2051364 TCF3 JASPAR yes 52729960
chr17 2051354 2051364 TCF4 JASPAR yes 52729961
chr17 2051355 2051364 SNAI2 JASPAR yes 52729962
Genes associated with rs139340308[chr17:2051355], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More