EnhancerDB
  1. Home
  2. SNP
  3. rs139350277[chr17:55503201]
Enhancers that have rs139350277[chr17:55503201]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139350277[chr17:55503201]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55503189 55503202 TFAP2A JASPAR yes 54954256
chr17 55503189 55503202 TFAP2B JASPAR yes 54954257
chr17 55503189 55503202 TFAP2C JASPAR yes 54954258
chr17 55503189 55503203 GLIS3 JASPAR yes 54954259
Genes associated with rs139350277[chr17:55503201], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More