EnhancerDB
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  3. rs139354683[chr1:25058270]
Enhancers that have rs139354683[chr1:25058270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139354683[chr1:25058270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25058255 25058273 RARA JASPAR yes 27524595
chr1 25058265 25058285 ESR1 JASPAR yes 27524597
chr1 25058269 25058287 NR3C1 JASPAR yes 27524598
Genes associated with rs139354683[chr1:25058270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More