EnhancerDB
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  3. rs139373086[chr12:121288613]
Enhancers that have rs139373086[chr12:121288613]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 121282565 121298722 enh2642
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673)
Transcript factors that have rs139373086[chr12:121288613]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 121288604 121288616 ZBTB7A JASPAR yes 124189349
chr12 121288608 121288618 FIGLA JASPAR yes 124189350
chr12 121288608 121288618 TCF3 JASPAR yes 124189351
chr12 121288609 121288618 SNAI2 JASPAR yes 124189352
chr12 121288610 121288615 USF2 TRANSFAC yes 124189353
Genes associated with rs139373086[chr12:121288613], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More