EnhancerDB
  1. Home
  2. SNP
  3. rs139375801[chr16:85351743]
Enhancers that have rs139375801[chr16:85351743]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139375801[chr16:85351743]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85348726 85352067 ZNF143 GTRD no Epithelial (MCF-7) 21723244
chr16 85348811 85351800 ZNF143 GTRD no Epithelial (MCF-7) 21723249
chr16 85349283 85351816 TCF7L2 GTRD no Colon (HCT116) 21723265
chr16 85350261 85351994 TCF7L2 GTRD no Colon (HCT116) 21723338
chr16 85350390 85351744 ZBTB33 GTRD no Brain (SK-N-SH) 21723339
chr16 85350471 85351756 ZNF143 GTRD no Epithelial (MCF-7) 21723340
chr16 85350617 85351747 ZNF143 GTRD no Epithelial (MCF-7) 21723344
chr16 85350639 85351746 ZBTB33 GTRD no Brain (SK-N-SH) 21723346
chr16 85351725 85351744 REST JASPAR yes 12046671
Genes associated with rs139375801[chr16:85351743], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More