EnhancerDB
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  3. rs139409172[chr1:55038057]
Enhancers that have rs139409172[chr1:55038057]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139409172[chr1:55038057]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55038041 55038059 ESR1 JASPAR yes 28994045
chr1 55038041 55038059 ESR2 JASPAR yes 28994046
chr1 55038041 55038060 RFX2 JASPAR yes 28994047
chr1 55038042 55038057 ESR2 JASPAR yes 28994048
Genes associated with rs139409172[chr1:55038057], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More