EnhancerDB
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  3. rs139410256[chr17:78740380]
Enhancers that have rs139410256[chr17:78740380]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs139410256[chr17:78740380]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 21797161
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 108307245
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 108307246
chr17 78734050 78741138 ZNF274 GTRD no Blood (GM12878) 21797163
chr17 78734050 78741138 ZNF274 GTRD no Blood (GM12878) 108307248
chr17 78734050 78741138 ZNF274 GTRD no Blood (GM12878) 108307249
chr17 78734162 78741313 ZNF274 GTRD no Blood (GM12878) 21797164
chr17 78734162 78741313 ZNF274 GTRD no Blood (GM12878) 108307250
chr17 78734162 78741313 ZNF274 GTRD no Blood (GM12878) 108307251
chr17 78740374 78740389 SCRT1 JASPAR yes 56276917
chr17 78740375 78740387 GRHL1 JASPAR yes 56276918
chr17 78740378 78740384 PTF TRANSFAC yes 56276919
chr17 78740378 78740390 FOXI1 JASPAR yes 56276920
Genes associated with rs139410256[chr17:78740380], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More