EnhancerDB
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  3. rs139429319[chr2:38950260]
Enhancers that have rs139429319[chr2:38950260]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139429319[chr2:38950260]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38949844 38950303 RELA UCSC Txn Factor no Conserved 108431912
chr2 38950246 38950261 TFAP2A JASPAR yes 73170190
chr2 38950246 38950261 TFAP2C JASPAR yes 73170191
Genes associated with rs139429319[chr2:38950260], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More