EnhancerDB
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  3. rs139431804[chr17:49019253]
Enhancers that have rs139431804[chr17:49019253]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139431804[chr17:49019253]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49017994 49019671 ZNF274 GTRD no Liver (HepG2) 21771413
chr17 49018662 49019282 ZNF274 GTRD no Liver (HepG2) 21771418
chr17 49018752 49019455 ZNF274 GTRD no Liver (HepG2) 21771422
chr17 49018755 49019413 ZNF274 GTRD no Bone Marrow (K562) 21771423
chr17 49018837 49019382 ZNF274 GTRD no Bone Marrow (K562) 21771424
chr17 49018975 49019451 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771425
chr17 49019249 49019255 GATA3 JASPAR yes 54736977
Genes associated with rs139431804[chr17:49019253], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More