EnhancerDB
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  3. rs139434945[chr2:28871220]
Enhancers that have rs139434945[chr2:28871220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139434945[chr2:28871220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28871207 28871226 RFX2 JASPAR yes 72663905
chr2 28871219 28871236 ESR1 JASPAR yes 72663906
chr2 28871220 28871234 TLX1 JASPAR yes 72663907
chr2 28871220 28871235 ESR2 JASPAR yes 72663908
Genes associated with rs139434945[chr2:28871220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More