EnhancerDB
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  3. rs139440905[chr17:62990309]
Enhancers that have rs139440905[chr17:62990309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139440905[chr17:62990309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62990305 62990317 POU2F1 JASPAR yes 55336744
chr17 62990305 62990319 POU1F1 JASPAR yes 55336745
chr17 62990306 62990318 POU3F1 JASPAR yes 55336746
chr17 62990306 62990318 POU3F2 JASPAR yes 55336747
chr17 62990306 62990319 POU2F2 JASPAR yes 55336748
chr17 62990307 62990316 POU3F4 JASPAR yes 55336749
chr17 62990307 62990316 POU5F1B JASPAR yes 55336750
Genes associated with rs139440905[chr17:62990309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More