EnhancerDB
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  3. rs139479519[chr17:25901006]
Enhancers that have rs139479519[chr17:25901006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25884725 25904399 enh17065
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 25898536 25901861 vista677
VISTA
Transcript factors that have rs139479519[chr17:25901006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25900937 25901261 BACH1 UCSC Txn Factor no Conserved 107687828
chr17 25900962 25901255 MAFK UCSC Txn Factor no Conserved 107687829
chr17 25900969 25901229 MAFF UCSC Txn Factor no Conserved 107687830
chr17 25900989 25901289 JUND UCSC Txn Factor no Conserved 107687831
chr17 25900992 25901007 FOXA1 JASPAR yes 9240
chr17 25900992 25901007 FOXA1 JASPAR yes 53647398
chr17 25900994 25901007 POU2F2 JASPAR yes 9241
chr17 25900994 25901007 POU2F2 JASPAR yes 53647399
chr17 25900994 25901008 POU1F1 JASPAR yes 9242
chr17 25900994 25901008 POU1F1 JASPAR yes 53647400
chr17 25900995 25901007 POU3F1 JASPAR yes 9243
chr17 25900995 25901007 POU3F2 JASPAR yes 9244
chr17 25900995 25901007 POU3F1 JASPAR yes 53647401
chr17 25900995 25901007 POU3F2 JASPAR yes 53647402
chr17 25900995 25901008 POU3F3 JASPAR yes 9245
chr17 25900995 25901008 POU3F3 JASPAR yes 53647403
chr17 25900996 25901008 POU2F1 JASPAR yes 9247
chr17 25900996 25901008 POU2F1 JASPAR yes 53647405
chr17 25900997 25901006 POU3F4 JASPAR yes 9252
chr17 25900997 25901006 POU5F1B JASPAR yes 9253
chr17 25900997 25901006 POU3F4 JASPAR yes 53647410
chr17 25900997 25901006 POU5F1B JASPAR yes 53647411
chr17 25901002 25901006 YY1 TRANSFAC yes 9254
chr17 25901002 25901006 YY1 TRANSFAC yes 53647412
Genes associated with rs139479519[chr17:25901006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More