EnhancerDB
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  3. rs139483852[chr1:223891015]
Enhancers that have rs139483852[chr1:223891015]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139483852[chr1:223891015]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223891009 223891030 IRF1 JASPAR yes 35669838
chr1 223891014 223891029 FOXP1 JASPAR yes 35669839
chr1 223891015 223891030 FOXP1 JASPAR yes 35669840
Genes associated with rs139483852[chr1:223891015], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More