EnhancerDB
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  3. rs139485325[chr2:38946396]
Enhancers that have rs139485325[chr2:38946396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139485325[chr2:38946396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38946385 38946402 RXRA JASPAR yes 73169500
chr2 38946393 38946406 NR2F1 JASPAR yes 73169502
chr2 38946395 38946413 RARA JASPAR yes 73169503
Genes associated with rs139485325[chr2:38946396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More