EnhancerDB
  1. Home
  2. SNP
  3. rs139487801[chr12:49627875]
Enhancers that have rs139487801[chr12:49627875]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49623729 49631475 enh2326
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Uterus Blood (Karpas-422) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs139487801[chr12:49627875]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49626603 49628795 POLR2A UCSC Txn Factor no Conserved 108030035
chr12 49626603 49628795 POLR2A UCSC Txn Factor no Conserved 108030036
chr12 49627514 49628288 ZNF274 GTRD no Cervix (HeLa-S3) 108030108
chr12 49627532 49628334 ZBTB33 GTRD no Brain (SK-N-SH) 21544567
chr12 49627532 49628334 ZBTB33 GTRD no Brain (SK-N-SH) 108030109
chr12 49627532 49628360 ZNF274 GTRD no Cervix (HeLa-S3) 108030110
chr12 49627551 49628462 ZBTB33 GTRD no Brain (SK-N-SH) 21544568
chr12 49627551 49628462 ZBTB33 GTRD no Brain (SK-N-SH) 108030111
chr12 49627568 49628302 ZBTB33 GTRD no Brain (SK-N-SH) 21544569
chr12 49627568 49628302 ZBTB33 GTRD no Brain (SK-N-SH) 108030112
chr12 49627583 49628371 ZBTB33 GTRD no Lung (A549) 108030113
chr12 49627598 49628452 ZNF274 GTRD no Bone Marrow (K562) 21544570
chr12 49627598 49628452 ZNF274 GTRD no Bone Marrow (K562) 108030114
chr12 49627628 49628406 ZBTB33 GTRD no Brain (SK-N-SH) 21544571
chr12 49627628 49628406 ZBTB33 GTRD no Brain (SK-N-SH) 108030115
chr12 49627630 49628396 TCF7L2 GTRD no Colon (HCT116) 108030116
chr12 49627687 49628390 ZNF274 GTRD no Cervix (HeLa-S3) 108030117
chr12 49627723 49628452 ZBTB33 GTRD no Brain (SK-N-SH) 21544572
chr12 49627723 49628452 ZBTB33 GTRD no Brain (SK-N-SH) 108030118
chr12 49627735 49628418 TCF7L2 GTRD no Colon (HCT116) 108030119
chr12 49627776 49628303 ZNF274 GTRD no Liver (HepG2) 108030120
chr12 49627829 49628425 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544573
chr12 49627829 49628425 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030121
chr12 49627856 49628331 ZNF143 GTRD no Epithelial (MCF-7) 108030122
chr12 49627860 49627881 ZNF263 JASPAR yes 120766995
chr12 49627863 49627884 IRF1 JASPAR yes 120766996
chr12 49627865 49627886 ZNF263 JASPAR yes 120766997
chr12 49627867 49627881 SPI1 JASPAR yes 120766998
chr12 49627867 49627881 SPIC JASPAR yes 120766999
chr12 49627867 49627881 STAT1 JASPAR yes 120767000
chr12 49627867 49627882 STAT2 JASPAR yes 120767001
chr12 49627867 49627888 ZNF263 JASPAR yes 120767002
chr12 49627871 49627892 ZNF263 JASPAR yes 120767003
chr12 49627872 49627893 ZNF263 JASPAR yes 120767004
chr12 49627873 49627878 ETS2 TRANSFAC yes 120767005
chr12 49627874 49627895 ZNF263 JASPAR yes 120767006
chr12 49627875 49627896 ZNF263 JASPAR yes 120767007
Genes associated with rs139487801[chr12:49627875], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More