EnhancerDB
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  3. rs139498578[chr19:13965811]
Enhancers that have rs139498578[chr19:13965811]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139498578[chr19:13965811]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13964390 13966469 AR GTRD no Prostate (PC-3) 21852771
chr19 13965239 13965971 TCF7L2 GTRD no Colon (HCT116) 21852777
chr19 13965258 13967317 ZNF143 GTRD no Epithelial (MCF-7) 21852778
chr19 13965317 13966059 TCF7L2 GTRD no Colon (HCT116) 21852779
chr19 13965445 13966199 TCF7L2 GTRD no Colon (HCT116) 21852780
chr19 13965460 13967356 ZNF143 GTRD no Epithelial (MCF-7) 21852781
chr19 13965461 13965869 TCF7L2 GTRD no Colon (HCT116) 21852782
chr19 13965470 13966728 ZNF143 GTRD no Epithelial (MCF-7) 21852783
chr19 13965704 13966094 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852784
chr19 13965801 13965812 FOSL2 JASPAR yes 112539074
Genes associated with rs139498578[chr19:13965811], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More