EnhancerDB
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  3. rs139508855[chr1:8497489]
Enhancers that have rs139508855[chr1:8497489]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139508855[chr1:8497489]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8497475 8497490 SCRT1 JASPAR yes 26554030
chr1 8497479 8497489 FIGLA JASPAR yes 26554032
chr1 8497479 8497489 SREBF2 JASPAR yes 26554033
chr1 8497479 8497489 TFAP4 JASPAR yes 26554034
chr1 8497487 8497501 ONECUT3 JASPAR yes 26554035
chr1 8497488 8497497 SOX9 JASPAR yes 26554036
chr1 8497488 8497509 IRF1 JASPAR yes 26554037
chr1 8497489 8497504 FOXP1 JASPAR yes 26554038
chr1 8497489 8497510 IRF1 JASPAR yes 26554039
Genes associated with rs139508855[chr1:8497489], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More