EnhancerDB
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  3. rs139520490[chr17:55458228]
Enhancers that have rs139520490[chr17:55458228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55440094 55459475 enh17241
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139520490[chr17:55458228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55458218 55458228 NFIA JASPAR yes 54948973
chr17 55458219 55458228 NFIX JASPAR yes 54948974
Genes associated with rs139520490[chr17:55458228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More