EnhancerDB
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  3. rs139533127[chr17:57919466]
Enhancers that have rs139533127[chr17:57919466]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57915645 57936791 enh17263
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139533127[chr17:57919466]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 107688742
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 108278238
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 21776393
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 107688870
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 108278239
chr17 57916673 57921496 ZNF143 GTRD no Epithelial (MCF-7) 21776429
chr17 57916673 57921496 ZNF143 GTRD no Epithelial (MCF-7) 107689020
chr17 57916886 57919796 ZNF143 GTRD no Epithelial (MCF-7) 21776443
chr17 57916886 57919796 ZNF143 GTRD no Epithelial (MCF-7) 107689041
chr17 57919204 57920984 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776532
chr17 57919213 57919955 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776533
chr17 57919451 57919472 ZNF263 JASPAR yes 55087547
chr17 57919460 57919471 DMRT3 JASPAR yes 55087549
chr17 57919464 57919469 GATA2 JASPAR yes 55087550
chr17 57919465 57919471 ZNF354C JASPAR yes 55087551
Genes associated with rs139533127[chr17:57919466], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More