EnhancerDB
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  3. rs139533949[chr1:232749523]
Enhancers that have rs139533949[chr1:232749523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs139533949[chr1:232749523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232749403 232749999 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21392289
chr1 232749430 232749894 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21392290
Genes associated with rs139533949[chr1:232749523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More