EnhancerDB
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  3. rs139535113[chr17:40410480]
Enhancers that have rs139535113[chr17:40410480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs139535113[chr17:40410480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40410470 40410487 RARA JASPAR yes 54290852
chr17 40410472 40410483 USF1 JASPAR yes 54290853
chr17 40410472 40410483 USF2 JASPAR yes 54290854
chr17 40410473 40410483 SREBF2 JASPAR yes 54290855
chr17 40410475 40410480 USF2 TRANSFAC yes 54290856
chr17 40410478 40410491 NR2F1 JASPAR yes 54290857
chr17 40410479 40410487 CREB1 JASPAR yes 54290858
Genes associated with rs139535113[chr17:40410480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More