EnhancerDB
  1. Home
  2. SNP
  3. rs139540694[chr2:25512268]
Enhancers that have rs139540694[chr2:25512268]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25506105 25541255 enh18357
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139540694[chr2:25512268]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25512266 25512270 H1TF2 TRANSFAC yes 72462207
chr2 25512266 25512270 NFE TRANSFAC yes 72462208
chr2 25512266 25512270 SRF TRANSFAC yes 72462209
Genes associated with rs139540694[chr2:25512268], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More