EnhancerDB
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  3. rs139562139[chr5:78047037]
Enhancers that have rs139562139[chr5:78047037]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs139562139[chr5:78047037]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78047027 78047041 ONECUT1 JASPAR yes 63621427
chr5 78047027 78047041 ONECUT2 JASPAR yes 63621428
chr5 78047027 78047041 ONECUT3 JASPAR yes 63621429
chr5 78047028 78047038 PAX3 JASPAR yes 63621430
chr5 78047028 78047038 PAX7 JASPAR yes 63621431
chr5 78047028 78047039 DUX4 JASPAR yes 63621432
chr5 78047033 78047038 H4TF1 TRANSFAC yes 63621433
Genes associated with rs139562139[chr5:78047037], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More