EnhancerDB
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  3. rs139568544[chr3:122202204]
Enhancers that have rs139568544[chr3:122202204]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 122199725 122206115 enh35831
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Uterus Epithelial (MCF-7)
chr3 122201925 122202222 vista42166
VISTA
Transcript factors that have rs139568544[chr3:122202204]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 122201794 122202384 IKZF1 UCSC Txn Factor no Conserved 108530075
chr3 122201918 122202318 FOS UCSC Txn Factor no Conserved 108530076
chr3 122201936 122202311 NFIC UCSC Txn Factor no Conserved 108530077
chr3 122201962 122202271 RUNX3 UCSC Txn Factor no Conserved 108530078
chr3 122201966 122202276 JUND UCSC Txn Factor no Conserved 108530079
chr3 122202028 122202208 BATF UCSC Txn Factor no Conserved 108530080
chr3 122202184 122202205 IRF1 JASPAR yes 5269114
chr3 122202184 122202205 IRF1 JASPAR yes 71039359
chr3 122202188 122202208 RREB1 JASPAR yes 5269117
chr3 122202188 122202208 RREB1 JASPAR yes 71039362
chr3 122202189 122202210 IRF1 JASPAR yes 5269118
chr3 122202189 122202210 IRF1 JASPAR yes 71039363
chr3 122202190 122202205 FOXP1 JASPAR yes 5269120
chr3 122202190 122202205 FOXP1 JASPAR yes 71039365
chr3 122202191 122202206 STAT2 JASPAR yes 5269121
chr3 122202191 122202206 STAT2 JASPAR yes 71039366
chr3 122202193 122202205 IRF1 JASPAR yes 5269122
chr3 122202193 122202205 IRF1 JASPAR yes 71039367
chr3 122202195 122202210 FOXP1 JASPAR yes 5269124
chr3 122202195 122202210 FOXP1 JASPAR yes 71039369
chr3 122202196 122202207 FOXP2 JASPAR yes 5269125
chr3 122202196 122202207 FOXP2 JASPAR yes 71039370
chr3 122202196 122202208 FOXC2 JASPAR yes 5269126
chr3 122202196 122202208 FOXC2 JASPAR yes 71039371
chr3 122202198 122202213 MEF2C JASPAR yes 5269127
chr3 122202198 122202213 MEF2C JASPAR yes 71039372
Genes associated with rs139568544[chr3:122202204], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More