EnhancerDB
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  3. rs139569178[chr12:58228268]
Enhancers that have rs139569178[chr12:58228268]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58223192 58238686 enh14761
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139569178[chr12:58228268]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58228250 58228271 ZNF263 JASPAR yes 121141099
chr12 58228265 58228275 ID4 JASPAR yes 121141100
chr12 58228265 58228275 TCF3 JASPAR yes 121141101
chr12 58228265 58228275 TCF4 JASPAR yes 121141102
chr12 58228266 58228275 SNAI2 JASPAR yes 121141103
chr12 58228266 58228286 TP63 JASPAR yes 121141104
chr12 58228267 58228272 USF2 TRANSFAC yes 121141105
Genes associated with rs139569178[chr12:58228268], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More